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MSc Program Requirements

In addition to completing your coursework, the majority of the MSc program consists of conducting a major research project in your lab. With feedback from meetings with your Supervisory Committee along the way, you will work toward presenting that research in the form of a written thesis and oral defence. While the thesis does not need to be published or represent a finished project, many MSc students transfer to the PhD program to continue and expand upon their work.

Completing the MSc typically takes two years. Below you'll find everything you need to know to navigate your MSc in Physiology from start to finish. 

Overview

To complete the MSc in Physiology you need to:

  • Select courses in consultation with your Supervisor and/or Supervisory Committee

  • Take 1.5 full-course equivalents (FCE's) in physiology courses (details below)

  • Meet with your Supervisory Committee and file an Annual Report about your research project each year of enrolment

  • Do one of the following within 24 months in the MSc program:

    • Transfer from the MSc into the PhD program without completing the thesis (details below, transfers usually happen at the 12-18 month mark)

    • Complete and defend a thesis approved by your External Defense Committee and graduate

    • Complete and defend a thesis approved by your External Defense Committee and go on to a PhD program, either in the Department of Physiology or a different department or university

Completing Annual GEMS Form

  • The Office of the Vice Dean, Research, Innovation and Health Science Education (RIHSE) uses the Graduate Education Management System (GEMS) to track the financial support its graduate students receive. This tracking system helps them to make sure you receive all of the funding to which you're entitled.

  • The Graduate Office will notify you when the GEMS form is available to fill out online each year.

  • Both you and your Supervisor are required to fill out the GEMS form online every year by September 30th.

Please refer to the RIHSE guidelines and FAQ for more information on this process.  

Course Completion Details

Completing courses in Physiology will broaden and deepen the knowledge you need to carry out an effective research project and thesis. The Department offers a wide range of fascinating courses each year, taught by faculty from all four of our research platforms.

Unique optional offerings include a six-week Graduate Professional Development course and an annual International Exchange in Developmental and Perinatal Biology with the Karolinska Institute in Stockholm, Sweden.


  • Sometimes courses outside of the Department can be beneficial to your degree. If you wish to take one, discuss with your Supervisor and submit a Course Permission Form that explains your rationale. Approval is granted by the Graduate Coordinator.

  • Please note that many courses are not offered every year; plan carefully and choose backup courses to avoid disappointment. 

  • FCE = Full course equivalent, which means either a Y (year) course that takes place in both the fall and winter terms, or two H (half) courses that each take place in only one term. As such, one H course = 0.5 FCE.

Requirement Timeline

RIHSE Graduate Research Integrity Workshop

Read the details at RIHSE. Deadlines will be available in Quercus.

0.5 FCE either graduate-only course or joint graduate-undergraduate course

Within first two years of study; typically completed in Year One

0.5 FCE graduate-only course

Within first two years of study; typically completed in Year One

0.5 FCE Seminars in Physiology course, PSL1000Y. Read course description for full details. This course has three components:

 
  1. Introduction to Scientific Communication Requirement

  2. Seminar Requirement (see course description for info on eligible seminars)

  3. Scientific Presentation Requirement: oral or poster presentation ideally at a national and/or international Scientific Meeting

  4. NOT REQUIRED, OPTIONAL: Graduate Professional Development component

  1. Lecture given at Orientation each September. Attend once.

  2. Attend at least 8 seminars per year enrolled.

  3. Complete within 24 months of starting the program (before thesis defense)

  4. Six-week course, takes place each January. 

Choosing courses

  • Click here to view Course Timetables. 

  • Select courses that will support your research project; seek advice from your Supervisor and/or Supervisory Committee as needed.

  • Seminars in Physiology (PSL1000H) and research activity (RST9999Y) are preloaded to students' records. Add all other Physiology courses using ACORN.

  • Sometimes courses outside of the Department can be beneficial to your degree. If you wish to take one, discuss with your supervisor and submit a Course Permission Form that explains your rationale.

  • Please ensure that you are aware of your enrollment status at all times. Refer to the School of Graduate Studies (SGS) Sessional Calendar for key deadlines.

Thesis & Supervisory Committee Details

There are several mandatory proposals, presentations, meetings, and finally a thesis to complete in the process of attaining the MSc in Physiology. The completion of each of these is tracked via the submission of one or more forms submitted to the Graduate Office. Please find the deadline for the submission of each of these forms below, and the details of how to complete each component in the drop downs. If you need clarification, please reach out to the Graduate Office

Requirement Deadline

Thesis Outline & Supervisory Committee form

September Start: October 15th

January start: February 15th

May start: June 15th

Supervisory Committee Report form for First Committee Meeting

September Start: December 20th

January start: April 30th

May start: December 20th

Annual Report form

Supervisory Committee Report form

All start dates: June 30th of each year enrolled

Student/Supervisor Discussion form

2 weeks after Supervisory Committee Meeting that discusses the Annual Report each year

Assemble your Supervisory Committee

What is the Supervisory Committee and what is its purpose?

  • The Committee members function as impartial mediators and advisors to help the student ensure their milestones are met and that their project is progressing at a good pace.

  • The Committee will meet with the student at the First Committee Meeting (detailed below) to review their Thesis Proposal and provide feedback and recommendations.

  • After the First Committee Meeting, you will meet with your Committee at least once per year enrolled to review and discuss your research and complete your Annual Report (due June 30th each year of enrollment).

  • Additional Supervisory Committee Meetings can be arranged if necessary to help you achieve your goals.

  • Read more about Supervisory Committees here.

How to assemble your Supervisory Committee

  • As soon as you begin your program, collaborate with your Supervisor to form a Supervisory Committee. 

  • The Committee will consist of the Supervisor and at least two other professors, one of whom must be appointed to the Department of Physiology (the other can be from another department).

  • Aim to choose members who will be available for at least two meetings per year and to serve in an advisory capacity throughout your degree.

  • Once the Committee is established, and all members have been confirmed, you are ready to fill out the Thesis Outline and Committee Information form and begin planning your First Committee Meeting (details below).

Thesis Outline & Supervisory Committee Information form

In the first month of your program, work with your Supervisor to complete and submit the Thesis Outline and Committee Information form to the Graduate Office by: 

September Start: October 15th; January start: February 15 ; May start: June 15th

The form has two components:

Supervisory Committee Information

As you work with your Supervisor to select your Committee, you can fill out this section with the members’ information.

Thesis Outline

Work with your Supervisor to write a 200 word summary of your proposed research project.  

Once you’ve completed and submitted the form, begin writing your Thesis Proposal and planning your First Committee Meeting (detailed below).

Thesis Proposal & First Committee Meeting

The First Committee Meeting must be held within four months of entry to the MSc program.

September Start: by December 20th; January start: by April 30th; May start: by December 20th

Before the Meeting

  • Produce a Thesis Proposal with help from your Supervisor. The proposal should include a rationale, hypothesis, prediction and test structure. Data is not required, but you can add it to the proposal or discuss at the meeting if you've made progress in the first few months of the program.

  • Submit this Proposal to the rest of the Committee members at least a week before the meeting.

  • Prepare to present the Proposal at the meeting; be sure to identify any problems you’ve encountered so far.

At the Meeting

  • Present your Proposal and discuss it with the Committee; this is a great time to ask questions and receive feedback about things to consider to ensure your project’s success.

  • Complete a Supervisory Committee Meeting Report form in collaboration with the Committee.

  • Discuss when the next Supervisory Committee Meeting should be and make a plan for the scheduling process.

After the Meeting

Annual Report & Supervisory Committee Meeting(s)

  • Regardless of your start date, you must submit an Annual Report by June 30th each year of your enrollment.

  • The Annual Report typically forms the basis of Supervisory Committee Meetings subsequent to the First Committee Meeting described above.

  • In addition to the First Committee Meeting, all students must have at least one Supervisory Committee Meeting per year of their enrollment.

  • Begin scheduling this meeting during or directly after the First Committee Meeting and plan to have the Annual Report ready one week before the meeting date. 

Completing and presenting the Annual Report 

  • The Annual Report builds on your Thesis Proposal and details your progress to date. 

  • Prepare this Report in collaboration with your Supervisor and send it to the Supervisory Committee at least one week before the meeting date. 

  • Prepare, present and discuss the Annual Report at the meeting

  • Submit the following to the Graduate Office by June 30th:

    • Annual Report form

    • Research progress report

    • Committee's comments

    • List of publications

    • List of scientific meetings attended

Within ten days of the meeting, complete the Student-Supervisor Discussion form with your Supervisor and submit it to the Graduate Office.

Additional Supervisory Committee Meetings:

  • You, your Supervisor, or the Graduate Coordinator can request additional Supervisory Committee Meetings as needed.

  • These can be used to further discuss problems and/or progress in the student's research either before or after the preparation of the Annual Report.

  • Should the student and Supervisor have difficulty reaching an agreement on major aspects of the student's research program, the student can ask the Graduate Coordinator to call and chair a Supervisory Committee Meeting.

  • A Supervisory Committee Meeting Report form must be submitted to the Graduate Administrator for each additional meeting.

Student/Supervisor Annual Assessment Meeting

  • After the Supervisory Committee meeting to discuss the Annual Report described above, the Supervisor must complete the Department of Physiology Student/Supervisor Discussion form

  • The Supervisor will then provide a completed copy to the student and set up a meeting to discuss progress, student strengths, and areas for improvement over the next year. This form should include overall comments, be signed by both the Supervisor and student, and submitted to the Graduate Office within two weeks of the Supervisory Committee Meeting (where the Annual Report was discussed).

  • The Supervisor will organize this part of the process, but be aware of the requirement and remind your Supervisor if needed.

Your Thesis: Getting Started

As you progress through the program, the “story” of your thesis will evolve based on the data you collect and the limitations presented by certain techniques and experiments.

Typically, students have most of their data collected within sixteen to eighteen months of the start of the program, especially if they plan to transfer to the PhD or aim to finish in two years. The timing is flexible, though, and depends on your project. Once you have the data, it’s time to map out, write, and defend your thesis.

Here are the steps:

  1. Discuss with your Supervisor

  • Determine together what experiments or data are still needed to have a complete “story” (i.e. what is still needed to make your project defendable?).

  • Be aware of the timeframe you are working with and reduce the possibility of new experiments as much as possible.

  1. Decide on your deadline

  • In collaboration with your Supervisor, decide which thesis submission deadline you are aiming for. SGS sets these deadlines annually.

  • Keep in mind that your stipend is only guaranteed for 24 months, and that missing an SGS sessional deadline will cost you additional tuition. Read about final year fees.

  • Once you have decided on the deadline, work backward from that date to schedule the next steps, ensuring you have time to get permission, write, and defend.

  1. Request permission to defend from your Supervisory Committee

  • MSc students typically request to defend their thesis at the Supervisory Committee Meeting at which they present their second Annual Report (see above for details on these meetings)

  • To ensure the approval is granted, include a roadmap detailing how you will complete the work as part of your Annual Report

Your Thesis: Write, Defend, Submit

Write your thesis

See Guidelines for tips and resources

Assemble your External Defense Committee

This committee must consist of: 

  • 1 Committee Chair (a member of your Research Platform, but not a member of your Supervisory Committee; chosen by the Department) 

  • 1 External Member (from outside of the Department, not a member of your Supervisory Committee)

  • 1 Examination Member (a field expert within the Department) 

  • 1 Supervisory Committee Member 

  • 1 Non-voting Member (your Supervisor)

Schedule your Defense

  • Four months before defense: Reach out to your External Defense Committee to make sure you have no scheduling conflicts and decide on a date.

  • 2-3 weeks (at least 10 business days) before defense: Submit copies of your thesis to all members.

  • 2 weeks (10 business days) before defense: Complete the MSc Arrangement for Thesis Defense form and submit to the Graduate Office.

  • 2 weeks (10 business days) before defense: Book a room for the defence. It can be on or off campus.

Prepare Your Presentation

  • The presentation of your thesis should be 20-25 minutes in length.

  • Try to tell a cohesive “story” when you present the results of your experiments.

  • Speak to how your work will change and/or fit into the current literature.

  • Detail the implications and significance of your findings.

Defend

  • Present your thesis as above, and answer questions from the Committee.

  • The MSc - Thesis Defense Report must be completed by the Chair of the External Defense Committee. The Committee should give reasons for its recommendation. 

  • Amendments or corrections may be required by the Committee before the Department's recommendation can be sent to the School of Graduate Studies. 

  • The form, including all signatures and comments should be submitted to the Graduate Office.

Edit and Submit

  • Most theses require minor edits (e.g. fixing typos, changing captions) Give yourself 3-4 weeks to complete these edits.

  • Follow the SGS instructions on submitting your finished thesis.

Transfer to PhD

Doing a transfer to a PhD means that instead of defending your MSc, you enter the PhD program and continue the research. If you've made substantial progress in your research about 16 months into the program, you love the work and feel prepared to continue in a rigorous research environment, you may wish to discuss a direct transfer to the PhD program with your Supervisor.

To transfer, you need to:

  • Have completed all MSc course requirements with a minimum A- average (see below for details)

  • Have generated enough research data for publication and/or an MSc thesis

  • Present a clearly defined plan for future research that continues or is consistent with work already underway

  • Please note that a project being “too large” for the MSc is not, on its own, a sufficient reason for transfer to the PhD program.

Steps toward Transfer

  • Arrange a Supervisory Committee Meeting to discuss the transfer, allowing enough time to submit the needed forms to the Graduate Office within 18 months of starting the program.

  • After the meeting, if the Supervisory Committee approves the transfer, ensure that the Supervisory Committee Meeting Report and Transfer from MSc to PhD Report confirming the committee’s recommendation are submitted to the Graduate Office.

  • For students seeking to transfer from the MSc to the PhD program beyond eighteen (18) months from the start date of the MSc program,  approval from the Graduate Coordinator prior to the transfer process is required.

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Course Information for Transfering Students

  • For candidates who are approved to transfer from the MSc to the PhD program, coursework completed while enrolled in the MSc program may be eligible for credit toward the minimum PhD course requirements, subject to departmental and SGS policies.
  • Candidates for whom transfer has been approved are advised to review the description of the mandatory PhD course, PSL1066H - Research Grant Proposal to familiarize themselves with its components and timelines.